Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924667.1_cds_XP_016472977.1_65153
CDS Infomation

[gene=LOC107794933] [db_xref=GeneID:107794933] [protein=E3 ubiquitin-protein ligase RNF14-like isoform X2] [protein_id=XP_016472977.1] [location=complement(join(11528..11667,11773..12004,13753..14138,14815..15331,15409..15483,17051..17560))] [gbkey=CDS]
Sequence

ATGTCAAGTTCAAAGGGAAGTCGCAAAGGATCAAAACCAACTCATTATTCTCGTCGCCAA
TTCAATAATCAAAATTGGGTAATCAAATCTCCTCTCAATCAAAATCCAATTGATCCAATA
GAAGTTTCAAAACAAGAACCCATTTCAGAGTTTATTCCAAAAGACCCAAAAAACCCTCAG
AATCACAAAAATTCCAAAAGGGTATCCAAGATTCGGCGTGCTCATGTGGTTAATGGAAAC
TTTGAGAAGAAAGAGGATGAAGTAGATATTGTAAAACAAGAAAGTGTTAAAGAGGAAGAA
AAGAGTGGTGAAAGTGTAGAGAAAGTGAAAGTTGAGGGGCCTGTTTTGGAAAATAGTGGT
GATAGTGTAGAGAAATTTGAGGGGTCTGTTTTGTATAATAATGATGTTGATTGTATTTGG
AGAAGGCTAGAGGAGCTGCAATTGAGTGCTGAGGAGCCCGAGTTATCGGCTGAACAGCTT
AGAATCAATGATCAAGCTCAGGAAGATGAGTTACTAGTGCTGGAATCAATTTATGGTGAC
AATGTCTTCATTCTTGATAGACAAAATGGCCTACGATCTTTTCAGATTCATATACATATT
GAAGTTCCTGATGAGCTGACGGTGTTTGTAAATTTAAGTTCCTCTGGTGCTCTAGGAATA
CCAGAAGATAGTTCATCTGAGTGCTCATACTCCTTCAAAGTTGAGCATTTACCACCAATT
GTGTTAACGTGTTTATTACCTAAATCATATCCGAGCCATCTTGCTCCTCACTTTACAATC
TCTGTCCAGTGGTTGGATTTGGCAAAAATTTCCTCTCTTTGCTCTATGCTTGATTCAATC
TGGAAGGATCAATTAGGTCAAGAGGTTATATACCAGTGGGTGGAGTGGTTGCATAGCTCT
TCTCTTTCTCATTTTCAGTTTGATCAAGAAATAAAGTTACGTTTTTGTGCCAAGAGTCAT
ATTGGAGATTGCCGAGCAATTTCAGGAACTGTCTCACCAGAGGTTGATATCCCCTCACTC
AAGAACTATGACGAGGAACAACGCCATGAGAATTTCCGTAGAAACATTCATCAGTGTTGC
ATATGTTTCAGCGAATTTCCTGGTATGGAGTTTGTGAGGTTGCCATGTCAACACTTTTTC
TGCTGGAGTTGCATGAAAACTTACTCCGATATGCATGTCAAGGAAGGTACAATCAGTAAG
CTTCTGTGCCCTGAGGCAAAATGTGGAGGTATGATTCCTCCGGGTTTGCTAAAGCGGTTA
CTCGGTGAAGTGGAGTTTGAACGTTGGGAATCAATGATGTTACAGAAAACGTTGGAATCA
ATGTCTGATGTGTGCTACTGCCCAAGATGCGAAACAATATGTATCGAGGATGAAGATGAG
CATGCCCAATGTGCAAAATGCTTCTATAGTTTTTGTACATTATGCAAAGAGAAGCGTCAT
GTCGGAGTTACGTGCATGACACCAGAAATGAAGCTTCTTATTTTGCAGGAGCGACAGAAT
TCATCTCAACTGAAAGATCACCAAAGGCACCGTGAGAAAGAAATGATCAATGAGATTCTC
AGTATGAAGGAAATTCACCGTTCCGCGAAGCAGTGCCCTTCCTGTAAGATGGCTATCTCG
CGAACTGAAGGCTGCAATAAGATGGTTTGCGATAATTGTGGAACATATTTCTGCTATCGC
TGTAATCAGAAAATTGAAGGATATGAGCACTTCAGGTTTGGGAGGGGAAATGTGAACTTT
TTCAACCAGAAGCAATTCAGATGTGGGAAGAGAGGATTAATCATCGCCAAGTGGTCGGTC
AGATTCAAGCTCAAATCTATGCTAATCATGGTCATCCTTGCCCTAATTGTGGCCAAATGA

Peptide Sequence

PEP ID

XP_016472977.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase RNF14-like isoform X2 [Nicotiana tabacum]
Sequence

MSSSKGSRKGSKPTHYSRRQFNNQNWVIKSPLNQNPIDPIEVSKQEPISEFIPKDPKNPQ
NHKNSKRVSKIRRAHVVNGNFEKKEDEVDIVKQESVKEEEKSGESVEKVKVEGPVLENSG
DSVEKFEGSVLYNNDVDCIWRRLEELQLSAEEPELSAEQLRINDQAQEDELLVLESIYGD
NVFILDRQNGLRSFQIHIHIEVPDELTVFVNLSSSGALGIPEDSSSECSYSFKVEHLPPI
VLTCLLPKSYPSHLAPHFTISVQWLDLAKISSLCSMLDSIWKDQLGQEVIYQWVEWLHSS
SLSHFQFDQEIKLRFCAKSHIGDCRAISGTVSPEVDIPSLKNYDEEQRHENFRRNIHQCC
ICFSEFPGMEFVRLPCQHFFCWSCMKTYSDMHVKEGTISKLLCPEAKCGGMIPPGLLKRL
LGEVEFERWESMMLQKTLESMSDVCYCPRCETICIEDEDEHAQCAKCFYSFCTLCKEKRH
VGVTCMTPEMKLLILQERQNSSQLKDHQRHREKEMINEILSMKEIHRSAKQCPSCKMAIS
RTEGCNKMVCDNCGTYFCYRCNQKIEGYEHFRFGRGNVNFFNQKQFRCGKRGLIIAKWSV
RFKLKSMLIMVILALIVAK

Transcript Sequence

Gene sequence data has not been registered.